//
//  CpGReporter.h
//  iBioCAD
//
//  Created by Orbitus on 10/24/07.
//  Copyright 2007 __MyCompanyName__. All rights reserved.
//

#import <Cocoa/Cocoa.h>


@interface CpGReporter : NSObject {
	IBOutlet NSButton *cpgButton;
	IBOutlet NSProgressIndicator *appRunningIndicator;
	IBOutlet NSArrayController *dnaArrayController;
	IBOutlet NSTextView*	cpgOutput;
	
	NSTask *myCpG;
	NSTask *newCpGSeek;
	NSTask *cpgPlot;
	NSTask *newCpGreport;
	
	NSPipe *pipe;
	NSMutableArray *myArguments;
	
	NSBundle*	myBundle;
	NSString*	myAppPath;
	NSString*	myAppFolderPath;
	NSString*	myBinFolderPath;
	NSString*	myDataFolderPath;
	NSString*	myDesktopFolderPath;
	NSString*	cpgReportPath;
	NSString*	newCpGReportPath;
	NSString*	newCpGSeekPath;
	NSString*	cpgPlotPath;
	
	
	NSManagedObjectContext	*managedObjectContext;
	NSManagedObjectModel	*managedObjectModel;
}
- (IBAction)CpG:(id)sender;

@end